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Ligand Binding Studies

and Binder Affinities

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Our ligand binding capabilities leverage both ligand-observed and target-observed NMR methods, enabling the identification of small-molecule binders, as well as protein–protein, nucleic acid, and peptide–target interactions. A key advantage of NMR-based ligand binding studies is that experiments are performed under physiologically relevant conditions, ensuring results that closely reflect true biological behavior.

 

Ligand-Observe Methods (e.g. STD/ waterLOGSY/ CPMG)

​These experiments focus on the spectral properties of the ligand, are not limited by target size and can provide the following information:

  • Provide rapid turnaround with high sensitivity

  • Require only small amounts of target and compound

  • Deliver a clear yes/no assessment of ligand binding

  • Offer insights into the nature of ligand–target interactions

  • Determine ligand binding stoichiometry

Target Observe Methods (e.g. HSQC/HMQC)​​​​

These experiments focus on the spectral properties of the target and provide powerful insights into:

  • Provide powerful insights into ligand binding site location

  • Reveal conformational changes in the target upon ligand binding

  • Deliver mechanistic understanding that can serve as a cornerstone for the chemistry/biology in therapeutic programs

  • Typically require 2D NMR methods and an isotopically labeled target

Binding constant determination (Kd)

Both ligand and target observe experiments can be used to accurately and precisely measure the affinity (dissociation constant, Kd) of ligands to their targets under biologically relevant conditions.

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Cambridge, MA 02138 

Tel. 978-496-0666

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